Lfdr {REBayes}

Local False Discovery Rate Estimation

Description

A Generic function for estimation of Local FDR

Usage

Lfdr(G, ...)

## S3 method for class 'GLVmix'
Lfdr(G, newdata, cnull, tail = "R", ...)

## S3 method for class 'WGLVmix'
Lfdr(G, newdata, cnull, tail = "R", ...)

## S3 method for class 'GLmix'
Lfdr(G, newdata, cnull, tail = "R", ...)

Arguments

G

A fitted object from some G-modeling function.

...

other arguments

newdata

data frame to in which to evaluate Lfdr

cnull

threshold for evaluation of Lfdr

tail

either "R" or "L" to specify tail focus

Details

Given an estimated mixing distribution, G, Lfdr computes an estimated local false discovery rate at a specified set of points and threshold value cnull. The argument G can be specified as the fitted object from one of several possible fitting routines for nonparametric mixing distributions.