getSPIAKEGGNetwork {RCPA}R Documentation

Get KEGG pathway network for SPIA method

Description

Get KEGG pathway network for SPIA method

Usage

getSPIAKEGGNetwork(org = "hsa", updateCache = FALSE)

Arguments

org

The organism abbreviation. E.g, hsa, mmu, dme, etc. To see the full list of supported organisms, visit https://www.genome.jp/kegg/catalog/org_list.html.

updateCache

A parameter to disable/enable cache update.

Value

A named list with three elements: network, names and sizes.

Examples


spiaNetwork <- getSPIAKEGGNetwork("hsa")


[Package RCPA version 0.2.3 Index]