getCePaPathwayCatalogue {RCPA} | R Documentation |
Get KEGG pathway catalogue (network) for CePa.ORA and CePa.GSA methods
Description
Get KEGG pathway catalogue for CePa.ORA and CePa.GSA methods
Usage
getCePaPathwayCatalogue(org = "hsa", updateCache = FALSE)
Arguments
org |
The organism abbreviation. E.g, hsa, mmu, dme, etc. To see the full list of supported organisms, visit https://www.genome.jp/kegg/catalog/org_list.html. |
updateCache |
A parameter to enable/disable cache update. |
Value
A named list with three elements: network, names and sizes for CePa.ORA and CePa.GSA methods.
Examples
cepaNetwork <- getCePaPathwayCatalogue("hsa")
[Package RCPA version 0.2.3 Index]