decision2S_boundary {RBesT} | R Documentation |
Decision Boundary for 2 Sample Designs
Description
The decision2S_boundary
function defines a 2 sample design
(priors, sample sizes, decision function) for the calculation of
the decision boundary. A function is returned which calculates the
critical value of the first sample y_{1,c}
as a function of
the outcome in the second sample y_2
. At the decision
boundary, the decision function will change between 0 (failure) and
1 (success) for the respective outcomes.
Usage
decision2S_boundary(prior1, prior2, n1, n2, decision, ...)
## S3 method for class 'betaMix'
decision2S_boundary(prior1, prior2, n1, n2, decision, eps, ...)
## S3 method for class 'normMix'
decision2S_boundary(
prior1,
prior2,
n1,
n2,
decision,
sigma1,
sigma2,
eps = 1e-06,
Ngrid = 10,
...
)
## S3 method for class 'gammaMix'
decision2S_boundary(prior1, prior2, n1, n2, decision, eps = 1e-06, ...)
Arguments
prior1 |
Prior for sample 1. |
prior2 |
Prior for sample 2. |
n1 , n2 |
Sample size of the respective samples. Sample size |
decision |
Two-sample decision function to use; see |
... |
Optional arguments. |
eps |
Support of random variables are determined as the
interval covering |
sigma1 |
The fixed reference scale of sample 1. If left unspecified, the default reference scale of the prior 1 is assumed. |
sigma2 |
The fixed reference scale of sample 2. If left unspecified, the default reference scale of the prior 2 is assumed. |
Ngrid |
Determines density of discretization grid on which decision function is evaluated (see below for more details). |
Details
For a 2 sample design the specification of the priors, the
sample sizes and the decision function, D(y_1,y_2)
, uniquely
defines the decision boundary
D_1(y_2) = \max_{y_1}\{D(y_1,y_2) = 1\},
which is the critical value of y_{1,c}
conditional on the
value of y_2
whenever the decision D(y_1,y_2)
function
changes its value from 0 to 1 for a decision function with
lower.tail=TRUE
(otherwise the definition is D_1(y_2) =
\max_{y_1}\{D(y_1,y_2) = 0\}
). The decision function may change at most at a single critical
value for given y_{2}
as only one-sided decision functions
are supported. Here, y_2
is defined for binary and Poisson
endpoints as the sufficient statistic y_2 = \sum_{i=1}^{n_2}
y_{2,i}
and for the normal case as the mean \bar{y}_2 = 1/n_2
\sum_{i=1}^{n_2} y_{2,i}
.
Value
Returns a function with a single argument. This function
calculates in dependence of the outcome y_2
in sample 2 the
critical value y_{1,c}
for which the defined design will
change the decision from 0 to 1 (or vice versa, depending on the
decision function).
Methods (by class)
-
decision2S_boundary(betaMix)
: Applies for binomial model with a mixture beta prior. The calculations use exact expressions. If the optional argumenteps
is defined, then an approximate method is used which limits the search for the decision boundary to the region of1-eps
probability mass. This is useful for designs with large sample sizes where an exact approach is very costly to calculate. -
decision2S_boundary(normMix)
: Applies for the normal model with known standard deviation\sigma
and normal mixture priors for the means. As a consequence from the assumption of a known standard deviation, the calculation discards sampling uncertainty of the second moment. The function has two extra arguments (with defaults):eps
(10^{-6}
) andNgrid
(10). The decision boundary is searched in the region of probability mass1-eps
, respectively fory_1
andy_2
. The continuous decision function is evaluated at a discrete grid, which is determined by a spacing with\delta_2 = \sigma_2/\sqrt{N_{grid}}
. Once the decision boundary is evaluated at the discrete steps, a spline is used to inter-polate the decision boundary at intermediate points. -
decision2S_boundary(gammaMix)
: Applies for the Poisson model with a gamma mixture prior for the rate parameter. The functiondecision2S_boundary
takes an extra argumenteps
(defaults to10^{-6}
) which determines the region of probability mass1-eps
where the boundary is searched fory_1
andy_2
, respectively.
See Also
Other design2S:
decision2S()
,
oc2S()
,
pos2S()
Examples
# see ?decision2S for details of example
priorT <- mixnorm(c(1, 0, 0.001), sigma=88, param="mn")
priorP <- mixnorm(c(1, -49, 20 ), sigma=88, param="mn")
# the success criteria is for delta which are larger than some
# threshold value which is why we set lower.tail=FALSE
successCrit <- decision2S(c(0.95, 0.5), c(0, 50), FALSE)
# the futility criterion acts in the opposite direction
futilityCrit <- decision2S(c(0.90) , c(40), TRUE)
# success criterion boundary
successBoundary <- decision2S_boundary(priorP, priorT, 10, 20, successCrit)
# futility criterion boundary
futilityBoundary <- decision2S_boundary(priorP, priorT, 10, 20, futilityCrit)
curve(successBoundary(x), -25:25 - 49, xlab="y2", ylab="critical y1")
curve(futilityBoundary(x), lty=2, add=TRUE)
# hence, for mean in sample 2 of 10, the critical value for y1 is
y1c <- futilityBoundary(-10)
# around the critical value the decision for futility changes
futilityCrit(postmix(priorP, m=y1c+1E-3, n=10), postmix(priorT, m=-10, n=20))
futilityCrit(postmix(priorP, m=y1c-1E-3, n=10), postmix(priorT, m=-10, n=20))