Robust Aggregative Feature Selection


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Documentation for package ‘RAFS’ version 0.2.4

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builtin_dist_funs All built-in feature dissimilarity functions
compute_fs_results Compute preliminary feature selection results for RAFS
cor_dist Feature dissimilarity based on Pearson's Correlation (cor)
create_seeded_folds Create seeded folds
default_dist_funs Default feature dissimilarity functions
default_fs_fun Default (example) feature selection function for RAFS
default_hclust_methods Default hclust methods
get_rafs_all_reps_from_popcnts Get all representatives from their popcnts
get_rafs_occurrence_matrix Get co-occurrence matrix from RAFS results
get_rafs_reps_popcnts Get representatives' popularity counts (popcnts) from RAFS results
get_rafs_rep_tuples_matrix Get representatives' tuples' co-representation matrix from RAFS results
get_rafs_rep_tuples_popcnts Get representatives' tuples' popularity counts (popcnts) from RAFS results
get_rafs_tops_popcnts Get top popularity counts (popcnts) from FS results
get_rafs_top_reps_from_popcnts Get top (i.e., most common) representatives from their popcnts
get_rafs_top_rep_tuples_from_popcnts Get top (i.e., most common) representatives's tuples from their popcnts
get_run_id Generate CV run identifiers
run_rafs Robust Aggregative Feature Selection (RAFS)
run_rafs_with_fs_results Robust Aggregative Feature Selection (RAFS) from feature selection results
stig_dist Symmetric Target Information Gain (STIG) computed directly
stig_from_ig_dist Symmetric Target Information Gain (STIG) computed from single Information Gains (IGs)
stig_stable_dist Symmetric Target Information Gain (STIG) computed directly but with pre-computed 1D conditional entropy (aka stable)
vi_dist Variation of Information (VI)