QRISK3_2017 {QRISK3} | R Documentation |
Cardiovascular Disease 10-year Risk Calculation (QRISK3 2017)
Description
This function allows you to calculate 10-year individual CVD risk using QRISK3-2017.
Usage
QRISK3_2017(
data,
patid,
gender,
age,
atrial_fibrillation,
atypical_antipsy,
regular_steroid_tablets,
erectile_disfunction,
migraine,
rheumatoid_arthritis,
chronic_kidney_disease,
severe_mental_illness,
systemic_lupus_erythematosis,
blood_pressure_treatment,
diabetes1,
diabetes2,
weight,
height,
ethiniciy,
heart_attack_relative,
cholesterol_HDL_ratio,
systolic_blood_pressure,
std_systolic_blood_pressure,
smoke,
townsend
)
Arguments
data |
Specifiy your data. |
patid |
Specifiy the patient identifier. |
gender |
1: women 0: men. |
age |
Specify the age of the patient in year (e.g. 64 years-old) |
atrial_fibrillation |
Atrial fibrillation? (0: No, 1:Yes) |
atypical_antipsy |
On atypical antipsychotic medication? (0: No, 1:Yes) |
regular_steroid_tablets |
On regular steroid tablets? (0: No, 1:Yes) |
erectile_disfunction |
A diagnosis of or treatment for erectile disfunction? (0: No, 1:Yes) |
migraine |
Do patients have migraines? (0: No, 1:Yes) |
rheumatoid_arthritis |
Rheumatoid arthritis? (0: No, 1:Yes) |
chronic_kidney_disease |
Chronic kidney disease (stage 3, 4 or 5)? (0: No, 1:Yes) |
severe_mental_illness |
Severe mental illness? (0: No, 1:Yes) |
systemic_lupus_erythematosis |
Systemic lupus erythematosis (SLE)? (0: No, 1:Yes) |
blood_pressure_treatment |
On blood pressure treatment? (0: No, 1:Yes) |
diabetes1 |
Diabetes status: type 1? (0: No, 1:Yes) |
diabetes2 |
Diabetes status: type 2? (0: No, 1:Yes) |
weight |
Weight of patients (kg) |
height |
Height of patients (cm) |
ethiniciy |
Ethic group must be coded as the same as QRISK3 1 White or not stated |
heart_attack_relative |
Angina or heart attack in a 1st degree relative < 60? (0: No, 1:Yes) |
cholesterol_HDL_ratio |
Cholesterol/HDL ratio? (range from 1 to 11, e.g. 4) |
systolic_blood_pressure |
Systolic blood pressure (mmHg, e.g. 180 mmHg) |
std_systolic_blood_pressure |
Standard deviation of at least two most recent systolic blood pressure readings (mmHg) |
smoke |
Smoke status must be coded as the same as QRISK3 1 non-smoker |
townsend |
Townsend deprivation scores |
Value
Return a dataset with three columns: patient identifier, caculated QRISK3 score, caculated QRISK3 score with only 1 digit
Examples
data(QRISK3_2019_test)
test_all <- QRISK3_2019_test
test_all_rst <- QRISK3_2017(data=test_all, patid="ID", gender="gender", age="age",
atrial_fibrillation="b_AF", atypical_antipsy="b_atypicalantipsy",
regular_steroid_tablets="b_corticosteroids", erectile_disfunction="b_impotence2",
migraine="b_migraine", rheumatoid_arthritis="b_ra",
chronic_kidney_disease="b_renal", severe_mental_illness="b_semi",
systemic_lupus_erythematosis="b_sle",
blood_pressure_treatment="b_treatedhyp", diabetes1="b_type1",
diabetes2="b_type2", weight="weight", height="height",
ethiniciy="ethrisk", heart_attack_relative="fh_cvd",
cholesterol_HDL_ratio="rati", systolic_blood_pressure="sbp",
std_systolic_blood_pressure="sbps5", smoke="smoke_cat", townsend="town")
test_all_rst$"QRISK_C_algorithm_score" <- test_all$"QRISK_C_algorithm_score"
test_all_rst$"diff" <- test_all_rst$"QRISK3_2017_1digit" - test_all_rst$"QRISK_C_algorithm_score"
print(test_all_rst$"diff")
print(identical(test_all_rst$"QRISK3_2017_1digit", test_all_rst$"QRISK_C_algorithm_score"))