FAST {ProFAST}

Run FAST model for a PRECASTObj object

Description

Run FAST model for a PRECASTObj object

Usage

FAST(PRECASTObj, q = 15, fit.model = c("poisson", "gaussian"))

Arguments

PRECASTObj

a PRECASTObj object created by CreatePRECASTObject.

q

an optional integer, specify the number of low-dimensional embeddings to extract in FAST

fit.model

an optional string, specify the version of FAST to be fitted. The Gaussian version models the log-count matrices while the Poisson verions models the count matrices; default as poisson.

Value

Return a revised PRECASTObj object with slot PRECASTObj@resList added by a FAST compoonent.

References

None