amr_presence {Plasmidprofiler}

Adds the AMR_gene column to report

Description

Appends the results of amr_positives to the report in column AMR_gene, missing have "-" instead

Usage

amr_presence(report, pos.samples)

Arguments

report

Dataframe of results produced by subsampler or combine_results

pos.samples

Two column DF of plasmid names and genes present produced by amr_positives

Value

Report with AMR_genes added

See Also

subsampler, combine_results

Examples

## Not run: 
amr_presence(report, pos.samples)

## End(Not run)