convert.eNewick {PhySortR} | R Documentation |
Converts Extended Newick Format to Traditional Newick Format
Description
Takes a phylogenetic tree in extended Newick format and converts it to
traditional Newick format that can be directly manipulated by packages such
as ape
and phytools
.
Usage
convert.eNewick(eNewick)
Arguments
eNewick |
phylogenetic tree in extended Newick format. |
Value
phylogenetic tree in traditional Newick format.
Examples
### Converts the phylogenetic tree into traditional Newick format.
tree <- "((A:0.1,(B:0.3,C:0.2):0.2[60]):0.4[100],(E:0.12,F:0.09):0.4[100]);"
new.tree <- convert.eNewick(tree)
new.tree
[Package PhySortR version 1.0.8 Index]