getRunQualityTemplate {PTXQC}

Get an mzQC runQuality without actual metrics, but with full metadata

Description

Get an mzQC runQuality without actual metrics, but with full metadata

Usage

getRunQualityTemplate(fc.raw.file, raw_file_mapping)

Arguments

fc.raw.file

For which run

raw_file_mapping

A data.frame with cols 'from', 'to' and maybe 'best.effort' (if shorting was unsuccessful), as e.g. obtained by a FilenameMapper$raw_file_mapping

Value

An MzQCrunQuality object