getAverageSpreadOf2SubpopClades {PAC}

Calculate the (global) average spread of subpopulations in clades with 2 subpopulations on the constellation plot.

Description

Calculate the (global) average spread of subpopulations in clades with 2 subpopulations on the constellation plot.

Usage

getAverageSpreadOf2SubpopClades(tsneResults, pacman_results)

Arguments

tsneResults

t-SNE output of clade centroids' embedding.

pacman_results

PAC-MAN analysis result matrix that contains network annotation, clade IDs and mean (centroid) clade expression levels.

Value

Returns global average of 2-subpopulation clade spread on the constellation plot.