| fitOneOxBS {OxyBS} | R Documentation |
Fit one OxyBS result
Description
Uses maximum likelihood to estimate (C,5mC,5hmC) for one CpG and one specimen
Usage
fitOneOxBS(betaBS, betaOxBS, signalBS, signalOxBS, eps=1E-5)Arguments
betaBS |
beta value from conventional bisulfite conversion |
betaOxBS |
beta value from oxy-bisulfite conversion |
signalBS |
total signal from conventional bisulfite conversion |
signalOxBS |
total signal from oxy-bisulfite conversion |
eps |
small positive value representing numerical zero |
Details
Uses maximum likelihood to estimate (C,5mC,5hmC) for one CpG and one specimen; not typically called by user.
Value
(C,5mC,5hmC) for one CpG and one specimen.
Author(s)
E. Andres Houseman
See Also
[Package OxyBS version 1.5 Index]