centroids_subtype |
Predict the subtypes of selected cancer type based published papers |
example_fpkm |
example FPKM data |
get_hvg |
select highly variable genes from a expression matrix |
get_median_centered |
convert expression matrix to median-centered |
get_rf_pred |
Predict the subtypes of selected cancer type |
hnsc_centroids |
HNSC predictor centroids |
load_dataset_from_github |
Load Dataset from GitHub Repository |
luad_centroids |
LUAD predictor centroids |
lusc_centroids |
LUSC predictor centroids |
ml_subtype |
Predict the subtypes of selected cancer type using machine learning |
PlotHeat |
Plot heatmap of the train set or test set |
SubtypeClass |
Set the SubtypeClass |
SubtypeClass-class |
Set the SubtypeClass |