getResultsIntersection {OmicNavigator}

getResultsIntersection

Description

getResultsIntersection

Usage

getResultsIntersection(
  study,
  modelID,
  anchor,
  mustTests,
  notTests,
  sigValue,
  operator,
  column
)

Arguments

study

An OmicNavigator study. Either an object of class onStudy, or the name of an installed study package.

modelID

Filter by modelID

anchor

The primary testID to filter the results

mustTests

The testIDs for which a featureID (or termID for enrichment) must pass the filters

notTests

The testIDs for which a featureID (or termID for enrichment) must not pass the filters. In other words, if a featureID passes the filter for a testID specified in notTests, that featureID is removed from the output

sigValue

The numeric significance value to use as a cutoff for each column

operator

The comparison operators for each column, e.g. "<"

column

The columns to apply the filters

Value

Returns a data frame with the results, similar to getResultsTable. Only rows that pass all the filters are included. The new column Set_Membership is a comma-separated field that includes the testIDs in which the featureID passed the filters.

See Also

getResultsTable