getEnrichmentsUpset {OmicNavigator}

getEnrichmentsUpset

Description

getEnrichmentsUpset

Usage

getEnrichmentsUpset(
  study,
  modelID,
  annotationID,
  sigValue,
  operator,
  type,
  tests = NULL
)

Arguments

study

An OmicNavigator study. Either an object of class onStudy, or the name of an installed study package.

modelID

Filter by modelID

annotationID

Filter by annotationID

sigValue

The numeric significance value to use as a cutoff for each column

operator

The comparison operators for each column, e.g. "<"

type

Type of p-value: ("nominal" or "adjusted")

tests

Restrict UpSet plot to only include these tests

Value

No return value. This function is called for the side effect of creating an UpSet plot.