Analysis of Evolutionary Rates in an OU Framework
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Documentation for package ‘OUwie’ version 2.10
Help Pages
| check.identify | A test of regime identifiability |
| fix.kappa | Adjust tree for matrix condition |
| OUwie | Generalized Hansen models |
| OUwie.anc | Estimate ancestral states given a fitted OUwie model |
| OUwie.boot | Parametric bootstrap function |
| OUwie.contour | Generates data for contour plot of likelihood surface |
| OUwie.dredge | Generalized Detection of shifts in OU process |
| OUwie.fixed | Generalized Hansen model likelihood calculator |
| OUwie.sim | Generalized Hansen model simulator |
| plot.OUwie.contour | Contour plot |
| trait | An example dataset |
| tree | An example dataset |