Normalized Stochasticity Ratio


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Documentation for package ‘NST’ version 3.1.10

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NST-package Normalized Stochasticity Ratio
ab.assign Randomly draw individuals into species according to specified probabilities
beta.g Various taxonomic beta diversity indexes
beta.limit Upper limit of different beta diversity (dissimilarity) indexes
beta.obs.rand Test data B observed and null beta diversity
bmntd.big beta mean nearest taxon distance (betaMNTD) from big data
chaojaccard Various taxonomic beta diversity indexes
chaosorensen Various taxonomic beta diversity indexes
cNST Normalized Stochasticity Ratio based on customized metrics and null results
dist.3col Transform distance matrix to 3-column matrix
match.name Check and ensure the consistency of IDs in different objects.
NST Normalized Stochasticity Ratio
nst.boot Bootstrapping test for ST and NST
nst.panova Permutational multivariate ANOVA test for ST and NST
null.models Options of null model algorithms
pNST Normalized Stochasticity Ratio based on phylogenetic beta diversity
taxo.null Null models of taxonomic beta diversity
tda Test dataset A
tNST Taxonomic Normalized Stochasticity Ratio (tNST)