NST-package |
Normalized Stochasticity Ratio |
ab.assign |
Randomly draw individuals into species according to specified probabilities |
beta.g |
Various taxonomic beta diversity indexes |
beta.limit |
Upper limit of different beta diversity (dissimilarity) indexes |
beta.obs.rand |
Test data B observed and null beta diversity |
bmntd.big |
beta mean nearest taxon distance (betaMNTD) from big data |
chaojaccard |
Various taxonomic beta diversity indexes |
chaosorensen |
Various taxonomic beta diversity indexes |
cNST |
Normalized Stochasticity Ratio based on customized metrics and null results |
dist.3col |
Transform distance matrix to 3-column matrix |
match.name |
Check and ensure the consistency of IDs in different objects. |
NST |
Normalized Stochasticity Ratio |
nst.boot |
Bootstrapping test for ST and NST |
nst.panova |
Permutational multivariate ANOVA test for ST and NST |
null.models |
Options of null model algorithms |
pNST |
Normalized Stochasticity Ratio based on phylogenetic beta diversity |
taxo.null |
Null models of taxonomic beta diversity |
tda |
Test dataset A |
tNST |
Taxonomic Normalized Stochasticity Ratio (tNST) |