Dose-Response Relationship Analysis of Nanomaterial Toxicity


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Documentation for package ‘NMTox’ version 0.1.0

Help Pages

adjPlot Plot the adjusted p-values, raw p-values and FDR level
FrCtrl Create a frequency table of the control values
Frtab Generate the number of unique values, the list of unique values, or the number of observations of specified variable(s)
Frtab.sub Count the number of observations for each unique value of a variable on a subset of data
geninvitro Genetic toxicity in vitro dataset
Isoplot Create plot(s) of the observations, the sample means and the fitted isotonic regression curve
IsoPlot.nm Create a plot of the observations, sample means and fitted isotonic regression curve for one nanomaterial
IsoPval.nm Calculate p-values based on permutation for both increasing and decreasing ordered alternatives
Isotest Calculate the test statistics and p-values for testing monotonic trend
IsoTest.nm Calculate the value of the test statistics for testing monotonic trend
nm400 NM-400 in vitro dataset
nmplot Create plots of the dose and the response for each nanomaterial in the dataset
nmplot.cat Create plots of the dose and the response grouped by a variable
nmplot.n Create plots of the dose and the response for every unique value of a certain variable
nmplot.ncat Create plots of the dose and the response differentiated by specified variables
SplitData Split the data of each nanomaterial into different subsets of data
SubsetData Create a subset of data