setup_mosquito_BQ {MicroMoB} | R Documentation |
Setup blood feeding & oviposition (BQ) behavioral state mosquito model
Description
This is a behavioral state model which allows for time varying EIP and survival probability. Mosquitoes transition between blood feeding (B) and oviposition (Q) depending on the success (or not) of those biological activities. It complies with the mosquito component interface, and may be simulated deterministically or stochastically.
Usage
setup_mosquito_BQ(
model,
stochastic,
eip,
pB,
pQ,
psiQ,
Psi_bb,
Psi_bq,
Psi_qb,
Psi_qq,
nu = 25,
M,
Y
)
Arguments
model |
an object from make_MicroMoB |
stochastic |
should the model update deterministically or stochastically? |
eip |
the Extrinsic Incubation Period (may be time varying see time_varying_parameter) |
pB |
daily survival probability during blood feeding (may be time and patch varying see time_patch_varying_parameter) |
pQ |
daily survival probability during oviposition (may be time and patch varying see time_patch_varying_parameter) |
psiQ |
oviposition success probability (may be time and patch varying see time_patch_varying_parameter) |
Psi_bb |
movement matrix from blood feeding haunts to blood feeding haunts (columns must sum to 1, |
Psi_bq |
movement matrix from blood feeding haunts to aquatic habitats (columns must sum to 1, |
Psi_qb |
movement matrix from aquatic habitats to blood feeding haunts (columns must sum to 1, |
Psi_qq |
movement matrix from aquatic habitats to aquatic habitats (columns must sum to 1, |
nu |
number of eggs laid per oviposition |
M |
number of susceptible mosquitoes (vector of length |
Y |
number of incubating mosquitoes (matrix with |
Value
no return value