setup_humans_SIR {MicroMoB}

Setup humans with SIR infection model

Description

A simple SIR (Susceptible-Infected-Recovered) model

Usage

setup_humans_SIR(
  model,
  stochastic,
  theta,
  wf = NULL,
  H,
  SIR,
  b = 0.55,
  c = 0.15,
  gamma = 1/5
)

Arguments

model

an object from make_MicroMoB

stochastic

should the model update deterministically or stochastically?

theta

a time spent matrix

wf

biting weights

H

vector of strata population sizes

SIR

a matrix giving S, I, R counts (columns) for each strata (rows)

b

transmission efficiency (mosquito to human)

c

transmission efficiency (human to mosquito)

gamma

rate of recovery

Value

no return value