miRNA_loadQualityThreshold {MiRNAQCD}

Load quality threshold values.

Description

This function loads from file a data frame containing the quality threshold values for a set of miRNAs.

Usage

miRNA_loadQualityThreshold(inputFileName, sep = "")

Arguments

inputFileName

Name of the file to be loaded. The file has to contain at least the columns 'miRNA', 'QualityThreshold' (not necessarily in this order).

sep

Field separator character; the default is any white space (one or more spaces or tabulations).

Value

A data frame containing the columns 'miRNA' and 'QualityThreshold'.

Please refer to the user manual installed in "/path-to-library/MiRNAQCD/doc/manual.pdf" for detailed function documentation. The path "/path-to-library" can be shown from R by calling ".libPaths()"

Examples

requiredFile = paste(system.file(package="MiRNAQCD"), "/extdata/test_dataset_alpha_qt.dat", sep='')
qtDataFrame <- miRNA_loadQualityThreshold(requiredFile)