Separate Metabolites into Likely Measurement Artifacts and True Metabolites


[Up] [Top]

Documentation for package ‘MetProc’ version 1.0.1

Help Pages

MetProc-package Separate Untargeted Metabolites into Likely Artifacts and Likely True Metabolites
corr_metric Calculate Correlation of Missing Rates between Pooled Plasma and Biological Samples
get_group Retrieve Index of Biological Samples and Pooled Plasma Samples
get_missing Compute Missing Rates of Biological Samples and Pooled Plasma Samples
heatmap_res Plot Patterns of Missing Data Across Metabolites
MetProc Separate Untargeted Metabolites into Likely Artifacts and Likely True Metabolites
met_proc Separates Metabolites into Likely True Metabolites and Likely Measurement Artifacts
plot_metric Plot Distribution of Metabolite Quality Metrics for Each Split of Data
plot_pp_sample_missing Plot Pooled Plasma and Biological Sample Missing Rates
read.met Read in a Metabolomics Dataset of Standard Structure
run_metric Calculate Longest Run of Blocks where Data is Present
sampledata Simulated Metabolomics Data
subset_met Group Metabolites based on Pooled Plasma Missing Rate
write.met Write Metabolomics Dataset of Standard Structure