addVisualization |
The 'Mercator' Distance Visualization Object |
barplot-method |
The 'Mercator' Distance Visualization Object |
binaryDistance |
Binary Distance Definitions Across Methods |
BinaryMatrix |
Class '"BinaryMatrix"' |
BinaryMatrix-class |
Class '"BinaryMatrix"' |
CML1000 |
CML Cytogenetic Data |
CML500 |
CML Cytogenetic Data |
dim-method |
The 'Mercator' Distance Visualization Object |
dim-method |
Class '"BinaryMatrix"' |
downsample |
Downsampling a Distance Visualization to Facilitate iGraph |
fakeclin |
CML Cytogenetic Data |
fakedata |
CML Cytogenetic Data |
getClusters |
The 'Mercator' Distance Visualization Object |
goodmanKruskalDistance |
Binary Distance Definitions Across Methods |
goodmanKruskalSimilarity |
Binary Distance Definitions Across Methods |
hammingDistance |
Binary Distance Definitions Across Methods |
hist-method |
The 'Mercator' Distance Visualization Object |
hist-method |
Class '"BinaryMatrix"' |
jaccardDistance |
Binary Distance Definitions Across Methods |
jaccardSimilarity |
Binary Distance Definitions Across Methods |
lgfFeatures |
CML Cytogenetic Data |
Mercator |
The 'Mercator' Distance Visualization Object |
Mercator-class |
The 'Mercator' Distance Visualization Object |
mercator-data |
CML Cytogenetic Data |
pearsonDistance |
Binary Distance Definitions Across Methods |
pearsonSimilarity |
Binary Distance Definitions Across Methods |
plot-method |
The 'Mercator' Distance Visualization Object |
print-method |
Class '"BinaryMatrix"' |
recluster |
Changing Cluster and Color Assignments in Mercator |
recolor |
Changing Cluster and Color Assignments in Mercator |
remapColors |
Changing Cluster and Color Assignments in Mercator |
removeDuplicateFeatures |
Remove Duplicate Features or Samples from a Binary Matrix Object |
removeDuplicates |
Remove Duplicate Features or Samples from a Binary Matrix Object |
russellRaoSimilarity |
Binary Distance Definitions Across Methods |
russelRaoDistance |
Binary Distance Definitions Across Methods |
scatter-method |
The 'Mercator' Distance Visualization Object |
setClusters |
Changing Cluster and Color Assignments in Mercator |
show-method |
Class '"BinaryMatrix"' |
sokalMichenerDistance |
Binary Distance Definitions Across Methods |
sokalMichenerSimilarity |
Binary Distance Definitions Across Methods |
summary-method |
The 'Mercator' Distance Visualization Object |
summary-method |
Class '"BinaryMatrix"' |
t-method |
Class '"BinaryMatrix"' |
ThreshedBinaryMatrix |
Threshing and Reaping the 'BinaryMatrix' |
ThreshedBinaryMatrix-class |
Threshing and Reaping the 'BinaryMatrix' |
threshLGF |
Threshing and Reaping the 'BinaryMatrix' |
validBinaryMatrix |
Class '"BinaryMatrix"' |
[-method |
The 'Mercator' Distance Visualization Object |
[-method |
Class '"BinaryMatrix"' |