MPSEM-package |
Modeling Phylogenetic Signals using Eigenvector Maps |
add.edge |
Graph Manipulation Functions |
add.vertex |
Graph Manipulation Functions |
as.data.frame.PEM |
Class and Methods for Phylogenetic Eigenvector Maps (PEM) |
collapse.vertex |
Graph Manipulation Functions |
EvolveOptimMarkovTree |
Simulates the Evolution of a Quantitative Trait. |
getAncGraphLocations |
Phylogenetic Eigenvector Maps |
getGraphLocations |
Phylogenetic Eigenvector Maps |
graph-class |
Class and Method for Directed Graphs |
graph-functions |
Graph Manipulation Functions |
lm-utils |
Linear Modelling Utility Functions |
lmforwardsequentialAICc |
Linear Modelling Utility Functions |
lmforwardsequentialsidak |
Linear Modelling Utility Functions |
Locations2PEMscores |
Phylogenetic Eigenvector Maps |
OUvar |
Simulates the Evolution of a Quantitative Trait. |
PEM-class |
Class and Methods for Phylogenetic Eigenvector Maps (PEM) |
PEM-functions |
Phylogenetic Eigenvector Maps |
PEM.build |
Phylogenetic Eigenvector Maps |
PEM.fitSimple |
Phylogenetic Eigenvector Maps |
PEM.forcedSimple |
Phylogenetic Eigenvector Maps |
PEM.updater |
Phylogenetic Eigenvector Maps |
PEMInfluence |
Phylogenetic Eigenvector Maps |
PEMvar |
Simulates the Evolution of a Quantitative Trait. |
PEMweights |
Phylogenetic Eigenvector Maps |
Phylo2DirectedGraph |
Graph Manipulation Functions |
pop.graph |
Graph Manipulation Functions |
predict.PEM |
Class and Methods for Phylogenetic Eigenvector Maps (PEM) |
print.graph |
Class and Method for Directed Graphs |
print.PEM |
Class and Methods for Phylogenetic Eigenvector Maps (PEM) |
rm.edge |
Graph Manipulation Functions |
rm.vertex |
Graph Manipulation Functions |
trait-simulator |
Simulates the Evolution of a Quantitative Trait. |
TraitOUsimTree |
Simulates the Evolution of a Quantitative Trait. |
TraitVarGraphSim |
Simulates the Evolution of a Quantitative Trait. |