enseqs {MINTplates}

Encode sequences

Description

Encode the sequences into their corresponding license plates with given prefix (if given one).

Usage

enseqs(sequences, prefix = "")

Arguments

sequences

The sequences being encoded.

prefix

The prefix to use for the license plate.

Value

The license plates they encode to.

References

Pliatsika V, Loher P, Telonis AG, Rigoutsos I. Bioinformatics (2016) <doi: 10.1093/bioinformatics/btw194>

Examples

seqs=c('AACCGGGCAGAAGCACCA','GAGCCCCAGTGGAACCACCA')
enseqs(seqs,'tRF')