add_events |
Add a column and check any previous events identified for a particular antibiotic |
check_previous_events |
Add a column and check any previous events identified for a particular antibiotic |
cleanse_urine_organism_names |
Cleanse organism names in Urine samples |
clean_antibiotics |
Clean Antibiotics using Fuzzy Matching with AMR Packages's Antibiotics Data. |
convert_all_directory_files_as_csv |
Convert All Directory Files to CSV - To be used in the Manual Build Process |
download_ndc_files_as_csv |
Download and Convert NDC Files to CSV - To be used in the Manual Build Process |
duplicated_microbioevents_records |
Transpose microbiology events dataset |
is_systemic_route |
Check 'route' is systemic or not |
ndc_is_antimicrobial |
Check 'ndc' code is belongs to any Antimicrobial. |
ndc_to_antimicrobial |
Convert 'ndc' code to corresponding Antibiotic code. |
remove_files |
Remove Files - To be used in the Manual Build Process |
transpose_microbioevents |
Transpose microbiology events dataset |