gather_summary {MGMS2} | R Documentation |
gather_summary
Description
This function combines outputs from summarize_monospectra
.
Usage
gather_summary(x)
Arguments
x |
A list of multiple monomicrobial mass spectra information from |
Value
A list of combined summaries (data frames) of mass spectra from summarize_monospectra
and the corresponding species (a vector).
Examples
spectra.processed.A <- process_monospectra(
file=system.file("extdata", "listA.txt", package="MGMS2"),
mass.range=c(1000,2200))
spectra.processed.B <- process_monospectra(
file=system.file("extdata", "listB.txt", package="MGMS2"),
mass.range=c(1000,2200))
spectra.processed.C <- process_monospectra(
file=system.file("extdata", "listC.txt", package="MGMS2"),
mass.range=c(1000,2200))
spectra.mono.summary.A <- summarize_monospectra(
processed.obj=spectra.processed.A,
species='A', directory=tempdir())
spectra.mono.summary.B <- summarize_monospectra(
processed.obj=spectra.processed.B,
species='B', directory=tempdir())
spectra.mono.summary.C <- summarize_monospectra(
processed.obj=spectra.processed.C,
species='C', directory=tempdir())
mono.info=gather_summary(c(spectra.mono.summary.A, spectra.mono.summary.B, spectra.mono.summary.C))
[Package MGMS2 version 1.0.2 Index]