base_MQ {MGDrivE2}

Base Summary Function

Description

This function does the actual calculations for summarize_stats_CSV. It calculates mean and quantiles, writing output to the appropriate folder.

Usage

base_MQ(
  fList,
  oDir,
  sName,
  nodeNames,
  nNodes,
  genos,
  nGenos,
  times,
  nTimes,
  num_repss,
  mean,
  quantiles,
  oDepth
)

Arguments

fList

File list, all files for this stage, organized by repetition

oDir

Output directory

sName

Stage signifier

nodeNames

Properly formatted vector of node names for printing

nNodes

Number of nodes in the simulation

genos

Vector of genotypes for the header

nGenos

Number of genotypes

times

Vector of sampling times

nTimes

Number of sampled times

num_repss

Number of repetitions from the simulation

mean

Boolean, calculate mean or not

quantiles

Vector of quantiles to calculate, or NULL

oDepth

Max(1, number of quantiles)

Value

None