get.dist.loci {MDSMap}

Calculates the distance of a marker from some objective "truth".

Description

Calculates the distance of a marker from some objective "truth".

Usage

get.dist.loci(loci, estmap, realmap)

Arguments

loci

Character string or number specifying the marker name.

estmap

Data frame in which has a column called "names" containing marker names and a column called "position" containing marker positions.

realmap

Data frame in which the first column contains marker names and the second column marker positions. Column names are not necessary.

Details

Both the first column of realmap and estmap$name must contain markername, but aside from this they do not have to have identical entries.

Value

position in estmap-position in realmap