smr_major {LTASR}

Calculate SMRs for Major groupings

Description

smr_major will collapse minor outcomes into "major" groupings as defined in the rate object, rateobj.

Usage

smr_major(smr_minor_table, rateobj)

Arguments

smr_minor_table

A data.frame/tibble as created by smr_minor containing observed and expected number of deaths for each minor outcome

rateobj

A rate object created by parseRate, or the included rate object us_119ucod_19602021.

Value

A data.frame/tibble containing the expected and observed number of deaths as well as SMRs, lower CI and upper CI for each major as defined in the rate object rateobj

Examples

library(LTASR)
library(dplyr)

#Import example person file
person <- person_example %>%
  mutate(dob = as.Date(dob, format='%m/%d/%Y'),
         pybegin = as.Date(pybegin, format='%m/%d/%Y'),
         dlo = as.Date(dlo, format='%m/%d/%Y'))

#Import default rate object
rateobj <- us_119ucod_19602021

#Stratify person table
py_table <- get_table(person, rateobj)

#Calculate SMRs for all minors
smr_minor_table <- smr_minor(py_table, rateobj)

#Calculate SMRs major groupings found within rate file
smr_major(smr_minor_table, rateobj)