Calculate and Predict the Low Density Lipoprotein Values

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Documentation for package ‘LDLcalc’ version 2.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

AIPbootVrnc	Calculate variance of AIP using Bootstrapping.
AIPcalc	Calculation of Atherogenic Index of Plasma (AIP)
AIPErrPrp	Variance of Atherogenic Index of Plasma (AIP) using Error Propagation.
AIPErrPrp2Ord	Second Order Taylor expansion AIP Error propagation variance
AIP_DensityPlotOfbootst	Plot density of bootstrap and empirical variance for AIP
AIP_HDLVrnc	Calculate the variance of AIP when HDL changes.
AIP_TGVrnc	Calculate the variance of AIP when TG changes.
chebyshev	Chebysev's inequality
Corr_Plot	Correlation plot
CV	Calculate the CV of a set of values.
CV_Range	Change variance of distribution while keeping the mean constant
DensityPlotOfVar	Plot variance density
ErrorCorCov	Calculate correlation and covariance of residuals
JSD	Calculate the Jensen-Shannon divergence (JSD)
JSDNormal	Calculate the Jensen-Shannon divergence (JSD) between a discrete empirical distribution and the normal distribution.
LDLallEq	Calculates and returns the LDL values using all available equations
LDLbootVrnc	Calculate variance of LDL using bootstrapping.
LDLErrPrp	Calculate LDL variance using error propagation
LDL_CHOLVrnc	Calculate LDL variance when cholesterol variance changes
LDL_DensityPlotOfbootst	Plot density of bootstrap and empirical variance for LDL
LDL_eq	Calculates and returns the LDL Value for any of the 12 different equations
LDL_HDLVrnc	Calculate LDL variance when HDL variance changes
LDL_ML_Main	Create, train, assess and return an ML prediction model.
LDL_ML_Main_All_Models	Create, train, assess and return all ML prediction models
LDL_ML_Main_StackingAlgorithm	Create, train, assess and return a Stacking Algorithm Machine Learning prediction model
LDL_ML_predict	Predict LDL value(s)
LDL_TGVrnc	Calculate LDL variance when triglyceride variance changes
model	A trained model
plotAIP_HDLVrnc	Plots AIP variance versus increasing HDL variance
plotAIP_TGVrnc	Plots AIP variance versus increasing triglyceride variance
plotCholVrncToLDL	Plots LDL variance versus increasing cholesterol variance
PlotCorrWithRegrLine	Scatterplot of pairs of parameters
PlotDiscrHist	Plot discrete histogram
plotHDLVrncToLDL	Plots LDL variance versus increasing HDL variance
plotTGVrncToLDL	Plots LDL variance versus increasing triglyceride variance
sampleA	Anonymous real data
sampleB	Anonymous real data
SampleData	Anonymous real data