LDA_plot {LDAcoop}

LDA_plot

Description

plot clonogenic activity and survival (at more than one treatment group) for data from limiting dilution assay (LDA) experiments.

Usage

LDA_plot(LDA_tab, uncertainty = "act", xlim = NULL, uncertainty.band = FALSE)

Arguments

LDA_tab

LDA data.frame ("cells", "wells", "positive", "group", "replicate")

uncertainty

method for uncertainty calculation ("act", "ep")

xlim

setting xlim of clonogenic activity plot

uncertainty.band

plotting of uncertainty bands TRUE/FALSE

Value

none

Examples

data(LDAdata)
Z1 <- subset.data.frame(LDAdata,subset = name == unique(LDAdata$name)[1])
LDA_plot(Z1[,c("S-value","# Tested","# Clonal growth","Group","replicate")])