| get.cdn |
Get the cell differentiation network from a fitted Kalman Reaction Network. |
| get.fit |
Fit the state-space model to a clonal tracking dataset |
| get.sim.trajectories |
Simulate a clonal tracking dataset from a given cell differentiation network. |
| get.sMoments |
Get the first two-order smoothing moments from a fitted Kalman Reaction Network. |
| get.sMoments.avg |
Get the clone-average of the first two-order smoothing moments from a fitted Kalman Reaction Network. |
| nearestPD |
Nearest Positive Definite Matrix |
| Y_CT |
Clonal tracking data from clinical trials |
| Y_RM |
Rhesus Macaque clonal tracking dataset |
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