Performs the Joint Graphical Lasso for Sparse Inverse Covariance Estimation on Multiple Classes


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Documentation for package ‘JGL’ version 2.3.2

Help Pages

JGL-package Joint Graphical Lasso
crit Calculate the critical value of the FGL objective funciton.
example.data Toy two-class gene expression dataset.
gcrit Calculate the critical value of the GGL objective funciton.
JGL Joint Graphical Lasso
net.degree List the degree of every node in all classes.
net.edges List the edges in a network
net.hubs Get degrees of most connected nodes.
net.neighbors Get network neighbors of a node
screen.fgl Quickly identify connected features in the solution to FGL
screen.ggl Quickly identify connected features in the solution to GGL
subnetworks Identify subnetwork membership