ISOpureS2.model_optimize.kappa.kappa_compute_loglikelihood {ISOpureR}

Compute loglikelihood relevant to kappa for step 2

Description

Computes the part of the loglikelihood function relevant to optimizing kappa for step 2

Usage

ISOpureS2.model_optimize.kappa.kappa_compute_loglikelihood(kappa, model)

Arguments

kappa

a 1xK vector strength parameter in the prior over cc given the cancer profile mm

model

list containing all the parameters to be optimized

Value

The part of the loglikelihood function relevant to optimizing kappa

Author(s)

Gerald Quon, Catalina Anghel, Francis Nguyen