Functions and Data for the Book 'Integrated Population Models'

[Up] [Top]

Documentation for package ‘IPMbook’ version 0.1.5

Help Pages

IPMbook-package Functions and data for the book 'Integrated Population Models'
abbreviated Quick and dirty specification of matrices
bats Data for greater horseshoe bats from Switzerland, 1989-2017
bear Data for black bears in Louisiana, USA, 2007-2012
BetaDist The beta distribution
catbird Data for gray catbird from New England/Mid-Atlantic region, USA, 1992-2008
ch2matrix Convert capture histories in text format to a matrix
cleanCH Various helper functions
cormorant Data from three Danish cormorant breeding colonies, 1991-2004
createAge Creates an age matrix
dbeta2 The beta distribution
dbeta3 The beta distribution
demoMCMC Demonstration of a random-walk sampler for a single parameter
dgamma2 The gamma distribution
dUnif Discrete uniform prior distribution
elk Data from an elk population in USA, 1988-1993
fixAmatrix Quick and dirty specification of matrices
GammaDist The gamma distribution
getBeta2Par The beta distribution
getBeta3Par The beta distribution
getFirst Various helper functions
getGammaPar The gamma distribution
grouse Data for black grouse from Italy, 1997-2016
hoopoe Data for hoopoe from Switzerland, 2002-2017
IPMbook Functions and data for the book 'Integrated Population Models'
kestrel Data for kestrels from Switzerland, 2002-2016
marray Converts capture-histories to an m-array for one age class
marrayAge Creates age-dependent m-arrays
marrayDead Converts dead-recovery capture histories to an m-array
pbeta2 The beta distribution
pbeta3 The beta distribution
peregrine Data for peregrine falcons from the Jura Mountains, 1965-2007
pgamma2 The gamma distribution
qbeta2 The beta distribution
qbeta3 The beta distribution
qgamma2 The gamma distribution
rbeta2 The beta distribution
rbeta3 The beta distribution
redbacked Data for red-backed shrike from Germany, 1971-2006
rgamma2 The gamma distribution
rmFirst Various helper functions
simCapHist Simulates capture histories from a population
simCount Simulates count survey data
simCountBin Simulates count survey data
simCountNorm Simulates count survey data
simCountPois Simulates count survey data
simMHB Simulates detection and count data with spatial and temporal replication
simPop Simulates a population based on demographic parameters
simProd Simulates productivity data
stork Data on marked white storks in Germany, 1986-2001
summaryPop Calculates summary statistics from a subset of a population
swallow Data for barn swallows in Switzerland, 1997-2003
woodchat10 Simulated data for woodchat shrike for use in chapter 10
woodchat11 Data for woodchat shrike from Germany, 1964-1992
woodchat5 Simulated data for woodchat shrike for use in chapter 5
woodchat6 Simulated data for woodchat shrike for use in section 6.3
woodchat64 Simulated data for woodchat shrike for use in section 6.4
woodchat66 Simulated data for woodchat shrike for use in section 6.6
woodchat7 Simulated data for woodchat shrike for use in chapter 7
wryneck Data from wrynecks in Switzerland, 2002-2006
zInit Various helper functions
zInitDR Various helper functions
zKnown Various helper functions