FSA_msp_annotator {IDSL.FSA}

FSA msp annotator

Description

This function arranges the parameters for the annotation process

Usage

FSA_msp_annotator(PARAM_SPEC, libFSdb, address_input_msp, output_path,
allowedVerbose = TRUE)

Arguments

PARAM_SPEC

a parameter driven from the 'FSA_SpectraSimilarity_xlsxAnalyzer' module.

libFSdb

a converted .msp library reference files (FSDB) using the 'msp2FSdb' module

address_input_msp

address of the .msp files

output_path

output path

allowedVerbose

c(TRUE, FALSE). A 'TRUE' allowedVerbose provides messages about the flow of the function.

Value

A dataframe of matched annotated spectra stored in the output directory.