IDSL.CSA_MSPgenerator {IDSL.CSA} | R Documentation |
IDSL.CSA MSP Generator
Description
This function creates standard .msp files that can also be used for Pepsearch.
Usage
IDSL.CSA_MSPgenerator(CSA_peaklist, msLevel, spectral_search_mode = "dda",
spectral_search_mode_option = NA, number_processing_threads = 1)
Arguments
CSA_peaklist |
A dataframe peaklist of co-detected peaks |
spectral_search_mode |
Type of analysis. spectral_search_mode = c("dda", "dia", "csa") |
msLevel |
MS level = c(1, 2) |
spectral_search_mode_option |
Secondary type of analysis. spectral_search_mode_option = c(NA, "rawddaspectra", "alignedtable") |
number_processing_threads |
Number of processing threads for multi-threaded processing |
Value
A string of standard .msp file
[Package IDSL.CSA version 1.2 Index]