TSIXTriAllelics {HardyWeinberg}

Tri-allelic polymorphisms on the X chromosome of the TSI population

Description

This dataframe contains genotype counts for six three-allelic polymorphisms (A,B,C) on chromosome X of a sample of individuals from the TSI population (Tuscany, Italy) of the 1,000 genomes project.

Usage

data(TSIXTriAllelics)

Format

A data frame with 6 observations on the following 10 variables.

ID

Identifier of the polymorphism

A

Male A genotype count

B

Male B genotype count

C

Male C genotype count

AA

Female AA genotype count

AB

Female AB genotype count

AC

Female AC genotype count

BB

Female BB genotype count

BC

Female BC genotype count

CC

Female CC genotype count

Source

Data taken from the 1,000 genomes project at www.internationalgenome.org

References

Graffelman, J. and Ortoleva, L. (2020) A network algorithm for the X chromosomal exact test for Hardy-Weinberg equilibrium with multiple alleles. Under review.

Examples

data(TSIXTriAllelics)