JPTtriallelicsChr7 {HardyWeinberg}

Tri-allelic variants on chromosome 7 of the Japanese (JPT) sample of the 1000 genomes project

Description

JPTtriallelics contains six selected tri-allelic variants on chromosome 7 from the Japanese sample of the 1000 genomes project.

Usage

data("JPTtriallelicsChr7")

Format

A data frame with 6 observations on the following 14 variables.

id

RS identifier

pos

position in base pairs

mAA

number of AA males

mAB

number of AB males

mAC

number of AC males

mBB

number of BB males

mBC

number of BC males

mCC

number of CC males

fAA

number of AA females

fAB

number of AB females

fAC

number of AC females

fBB

number of BB females

fBC

number of BC females

fCC

number of CC females

Source

The The 1000 genomes project.

References

Graffelman, J. and Weir, B.S. (2017) Multi-allelic exact tests for Hardy-Weinberg equilibrium that account for gender. doi: 10.1101/172874. Table 9.

Examples

data(JPTtriallelicsChr7)
str(JPTtriallelicsChr7)