gene_comp {HaploCatcher}

Model Gene Compendium Data Set

Description

A data frame which contains information from 1345 unique wheat lines on the Sst1 solid stem locus.

Usage

gene_comp

Format

A data frame with 1345 rows and 7 columns:

Trait

A short discription of the phenotype associated with the gene

Chromosome

The chromosome where the gene resides

Gene

The name of the gene

Nursery

The program which produced the gene call for the genotype

Line

A breeder assigned line designation

FullSampleName

A designation unique to the line found in the genotypic matrix

Call

A 'call' given for the allelic state. For this package, it is best to format the non desiarable allele as "non_gene" and the heterozygous state as "het_gene".

Source

Generated by Zachary James Winn for the CSU breeding program via USDA-ARS gene reports and in-house gene assays

Examples

data("gene_comp") #lazy loads the dataset for use in the package