read_hdx {HaDeX} | R Documentation |
Read HDX-MS data file
Description
Imports data from a HDX-MS file and validates its content.
Usage
read_hdx(filename)
Arguments
filename |
a file supplied by the user. Formats allowed: .csv, .xlsx and .xls. |
Details
First version accepts files produced by DynamX 3.0 and 2.0 in 'cluster data' format. The function checks if all necessary columns are provided in correct format. The file must include at least two repetitions of the measurement for the uncertainty to be calculated.
Value
dat
- a data.frame
with validated content.
See Also
calculate_kinetics
calculate_state_deuteration
plot_coverage
plot_position_frequency
prepare_dataset
quality_control
reconstruct_sequence
Examples
# read example data
head(read_hdx(system.file(package = "HaDeX",
"HaDeX/data/KD_180110_CD160_HVEM.csv")))
[Package HaDeX version 1.2.2 Index]