expr_param_extract {HTSSIP} | R Documentation |
Extract all quoted values in the expression used for phyloseq subsetting.
Description
This can be useful for creating custom (shorter) labels for each subset relative to using the entire subsetting expression.
Usage
expr_param_extract(ex, collapse = NULL)
Arguments
ex |
Expression for subsetting the phyloseq object |
collapse |
Similar to the collapse parameter in |
Value
If length(ex) == 1
, then a vector of quoted values in the input string.
If length(ex) > 1
, then a matrix or list of quote values,
1 column/index per input string.
Examples
ex = '(Substrate=="12C-Con" & Day=="14")'
expr_param_extract(ex)
ex = '(Substrate=="12C-Con" & Day=="14") | (Substrate=="13C-Cel" & Day == "14")'
expr_param_extract(ex)
# returns a matrix
ex = c('(Substrate=="12C-Con" & Day=="14")',
'(Substrate=="13C-Cel" & Day == "14")')
expr_param_extract(ex)
# returns a list
ex = c('(Substrate=="12C-Con" & Day=="14")',
'(Substrate=="13C-Cel" & Day == "14")',
'(Substrate=="13C-Cel")')
expr_param_extract(ex)
[Package HTSSIP version 1.4.1 Index]