| himaDat {HIMA} | R Documentation |
Example datasets for HIMA demo
Description
A list dataset containing datasets for various scenarios of HIMA. Each dataset contains a phenotype
data frame and a high-dimension mediator data matrix. The datasets are simulated using parameters generated
from real datasets. The code used to generate the data can be found in /inst/script folder of the package.
Usage
himaDat
Format
An object of class list of length 5.
Details
Example dataset 1 for HIMA: Continuous outcome
Treatment: treated (value = 1) or not treated (value = 0)
Outcome: outcome of the treatment- a normally distributed continuous variable
Sex: female (value = 1) or male (value = 0)
Age: Age of the participant
Example dataset 2 for HIMA: Binary outcome
Treatment: treated (value = 1) or not treated (value = 0)
Disease: diseased (value = 1) or healthy (value = 0)
Sex: female (value = 1) or male (value = 0)
Age: Age of the participant
Example dataset 3 for HIMA: Survival data outcome
Treatment: treated (value = 1) or not treated (value = 0)
Status: Status indicator: dead (value = 1) or alive (value = 0)
Time: time to event
Sex: female (value = 1) or male (value = 0)
Age: Age of the participant
Example dataset 4 for HIMA: Compositional mediator (e.g., microbiome)
Treatment: treated (value = 1) or not treated (value = 0)
Outcome: outcome of the treatment- a normally distributed continuous variable
Sex: female (value = 1) or male (value = 0)
Age: Age of the participant
Example dataset 5 for HIMA: High-dimensional quantile mediation analysis
Treatment: treated (value = 1) or not treated (value = 0)
Outcome: outcome of the treatment- abnormally distributed continuous variable
Sex: female (value = 1) or male (value = 0)
Age: Age of the participant
Value
A list of example datasets for HIMA demo and testing.