chi11 | Sample data set for CyTOF Stimulation Assay |
HDStIM | HDStIM: High Dimensional Stimulation Immune Mapping |
marker_ranking_boruta | Marker Ranking by Boruta |
plot_exprs | Diagnostic plots showing individual marker distribution before and after mapping by HDStIM |
plot_K_Fisher | Diagnostic plots explaining K-means clustering and Fisher's exact test carried out by HDStIM |
plot_umap | Diagnostic UMAP plots showing the partitioning of cells into responding and non-responding groups by HDStIM |