| COVID19 {HDNRA} | R Documentation |
HDNRA_data COVID19
Description
A COVID19 data set from NCBI with ID GSE152641. The data set profiled peripheral blood from 24 healthy controls and 62 prospectively enrolled patients with community-acquired lower respiratory tract infection by SARS-COV-2 within the first 24 hours of hospital admission using RNA sequencing.
Usage
data(COVID19)
Format
'COVID19'
A data frame with 86 observations on the following 2 groups.
- healthy group1
row 2 to row 19, and row 82 to 87, in total 24 healthy controls
- patients group2
row 20 to 81, in total 62 prospectively enrolled patients
References
Thair SA, He YD, Hasin-Brumshtein Y, Sakaram S, Pandya R, Toh J, Rawling D, Remmel M, Coyle S, Dalekos GN, others (2021). “Transcriptomic similarities and differences in host response between SARS-CoV-2 and other viral infections.” Iscience, 24(1). doi:10.1016/j.isci.2020.101947.
Examples
library(HDNRA)
data(COVID19)
dim(COVID19)
group1 <- as.matrix(COVID19[c(2:19, 82:87), ])
dim(group1)
group2 <- as.matrix(COVID19[-c(1:19, 82:87), ])
dim(group2)