plot_start_end {GenomeAdmixR} | R Documentation |
Plot both the starting frequencies and the final frequencies in one plot
Description
This function plots the distribution of both the starting and the final frequencies in one plot
Usage
plot_start_end(results, picked_ancestor = "ALL", picked_population = 1)
Arguments
results |
An object which is the result of |
picked_ancestor |
Default is "ALL", where different colors indicate different ancestors. Alternatively, for clarity, the user can specify a specific ancestral allele, and only that allele is plotted |
picked_population |
If multiple populations were simulated (in the case
of |
Value
a ggplot object
Examples
markers <- seq(from = 0.2, to = 0.3, length.out = 100)
pop <- simulate_admixture(
module = ancestry_module(number_of_founders = 3,
morgan = 1,
markers = markers),
pop_size = 1000,
total_runtime = 11)
require(ggplot2)
plot_start_end(pop,
picked_ancestor = "ALL")
plot_start_end(pop,
picked_ancestor = 1)
[Package GenomeAdmixR version 2.1.7 Index]