dgrp2.3R.5k.data {GenomeAdmixR} | R Documentation |
A subset of sequencing data from the Drosophila Genetics Reference Panel
Description
This data set contains sequences from the 3R chromosome. Included are 4603 SNPs with at least 0.05 minor allele frequency, sequenced across 410 isofemale lines. Sequences were downloaded from <http://dgrp2.gnets.ncsu.edu/data.html>.
Usage
data("dgrp2.3R.5k.data")
Format
genomeadmixr_data object
References
Mackay, T., Richards, S., Stone, E. et al. The Drosophila melanogaster Genetic Reference Panel. Nature 482, 173–178 (2012). <https://doi.org/10.1038/nature10811>
Examples
data("dgrp2.3R.5k.data")
simulate_admixture(
module = sequence_module(molecular_data = dgrp2.3R.5k.data),
pop_size = 100,
total_runtime = 10)
[Package GenomeAdmixR version 2.1.7 Index]