database {GESE} | R Documentation |
database file in example
Description
a data frame containing the GENE and MAF information for the variants under consideration in the public reference database.
Usage
data("database")
Format
A data frame of 20 observations on the following 3 variables.
SNP
an unique identifier for variant
GENE
a character vector: Gene name
MAF
a numeric vector: minor allele frequency of the variants in the referecne database
Details
A data frame containing the information for all the variants satisfying the same filtering criteria in the chosen reference genome. It should include at least three columns with these names: SNP (unique SNP ID), GENE (gene name), MAF (minor allele frequency for the variant in reference database for the corresponding population).
Source
Randomly simulated data.
Examples
data(database)
[Package GESE version 2.0.1 Index]