gen.genout {GENLIB}

Create pedigree data

Description

Creates data frame in pedigree format from an object of class GLgen

Usage

gen.genout( gen, sorted = FALSE)

Arguments

gen

An object of class GLgen obtained with gen.genealogy, gen.lineages or gen.branching. Required.

sorted

If sorted=FALSE (default), individual id number are not sorted in output data. Id numbers for parents will be placed before their children ids. If sorted=FALSE, individual id numbers will be sorted.

Value

returns a data.frame containing the following: ind father mother sex

See Also

gen.genealogy gen.graph gen.branching gen.lineages

Examples

data(geneaJi) 
# Original data is a data.frame
geneaJi[1:12,]

genJi<-gen.genealogy(geneaJi) 
# As a genealogy object
genJi

# Genealogy as a data.frame
genJi_df<-gen.genout(genJi)
genJi_df[1:12,]

# Maternal lineage
genJi_MaLi<-gen.lineages(geneaJi, maternal = TRUE) 
# Maternal lineage as a data.frame
genJi_MaLi_df<-gen.genout(genJi_MaLi)
genJi_MaLi_df